Produce premature mortality attributable to PM2.5 exposure based on the integrated exposure-response functions (IER) from Burnett et al (2014), consistent with the GBD 2016 study.
m3_get_mort_pm25(
db_path = NULL,
query_path = "./inst/extdata",
db_name = NULL,
prj_name = NULL,
prj = NULL,
rdata_name = NULL,
scen_name,
queries = "queries_rfasst.xml",
final_db_year = 2100,
mort_param = "GBD",
ssp = "SSP2",
saveOutput = T,
map = F,
anim = T,
recompute = F
)Burnett, R.T., Pope III, C.A., Ezzati, M., Olives, C., Lim, S.S., Mehta, S., Shin, H.H., Singh, G., Hubbell, B., Brauer, M. and Anderson, H.R., 2014. An integrated risk function for estimating the global burden of disease attributable to ambient fine particulate matter exposure. Environmental health perspectives, 122(4), pp.397-403.
Path to the GCAM database
Path to the query file
Name of the GCAM database
Name of the rgcam project. This can be an existing project, or, if not, this will be the name
rgcam loaded project
Name of the RData file. It must contain the queries in a list
Vector names of the GCAM scenarios to be processed
Name of the GCAM query file. The file by default includes the queries required to run rfasst
Final year in the GCAM database (this allows to process databases with user-defined "stop periods")
Method to compute the premature mortality estimates used in the plotting: GBD, GEMM, or FUSION
Set the ssp narrative associated to the GCAM scenario. c("SSP1","SSP2","SSP3","SSP4","SSP5"). By default is SSP2
Writes the emission files.By default=T
Produce the maps. By default=F
If set to T, produces multi-year animations. By default=T
If set to T, recomputes the function output. Otherwise, if the output was already computed once, it uses that value and avoids repeating computations. By default=F
Premature mortality attributable to PM2.5 exposure for each TM5-FASST regions for all years (# mortalities).